A metabolic model for members of the genus Tetrasphaera involved in enhanced biological phosphorus removal

 
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Project Description

    • Investigated the role of Tetrasphaera species as polyphosphate accumulating organisms (PAOs) in enhanced biological phosphorus removal (EBPR) systems.

    • Sequenced and analyzed genomes of four key Tetrasphaera isolates: T. australiensis, T. japonica, T. elongata, and T. jenkinsii.

    • Developed detailed metabolic models focusing on carbon and phosphorus pathways under anaerobic/aerobic conditions.

    • Identified unique physiological traits: fermentation of glucose, glycogen storage, and denitrification capabilities.

    • Confirmed that Tetrasphaera PAOs differ significantly from ‘Candidatus Accumulibacter phosphatis’, suggesting distinct ecological roles in EBPR communities.

    • Findings highlight Tetrasphaera’s physiological versatility and potential for optimizing biological phosphorus removal in full-scale wastewater treatment plants.

Project Details

    • Successfully reconstructed high-quality genomes of four Tetrasphaera species with >95% completeness, using de novo assembly and annotation via the MicroScope platform.

    • Identified 1283 conserved genes shared across all species, including those for core metabolic pathways: glycolysis, TCA cycle, and polyphosphate metabolism.

    • Discovered unique gene sets in each species, with up to 2924 unique genes in T. japonica, indicating high metabolic diversity.

    • All genomes showed potential for polyphosphate accumulation and degradation, with genes for both low- and high-affinity phosphate transporters.

    • Demonstrated versatile substrate uptake, including glucose, amino acids, and short-chain fatty acids, with all species carrying key transporter and activation genes.

    • Only T. japonica possessed genes for full PHA synthesis, suggesting it may use PHA as a storage polymer; all four can synthesize glycogen.

    • Revealed the ability for glucose fermentation, with species-specific end products such as lactate, alanine, succinate, and acetate.

    • Genomic evidence confirmed denitrification potential, including nitrate/nitrite reduction pathways; T. japonica also showed dissimilatory nitrate reduction to ammonia.

    • Experimental validation with T. elongata and T. japonica confirmed genomic predictions, showing:

      • Glucose uptake and phosphate release under anaerobic conditions.

      • Phosphate uptake and glycogen consumption in the aerobic phase.

      • T. elongata showed a typical PAO phenotype, releasing ~19 mgP/g dry biomass anaerobically and reabsorbing ~16 mgP/g in the aerobic phase.

      • T. japonica synthesized PHA anaerobically from glucose and completely reduced nitrate within 48 hours.

  • Sequenced genomes of four Tetrasphaera isolates (T. australiensis, T. elongata, T. japonica, and T. jenkinsii) to explore their metabolic capabilities.

  • Developed a new metabolic model for Tetrasphaera based on genomic data and experimental validation.

  • Demonstrated the metabolic versatility of Tetrasphaera, including abilities to ferment, store glycogen, and accumulate polyphosphate under EBPR conditions.

  • Showed that dominant Tetrasphaera species in full-scale plants can be active in both anaerobic and aerobic phases, contributing to enhanced phosphorus removal.

  • Provided insights into key differences between Tetrasphaera and Accumulibacter, highlighting their complementary roles in EBPR systems.

  • Built a foundation for future studies on gene regulation, niche differentiation, and process optimization in wastewater treatment.

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